CDS

Accession Number TCMCG057C05577
gbkey CDS
Protein Id XP_018469630.1
Location join(15105498..15105972,15105975..15106269,15106687..15107373,15107620..15108184,15108186..15108533,15108752..15108956,15113959..15114033,15114200..15114324,15114411..15114811,15114906..15114934,15115211..15115687,15115781..15116559)
Gene LOC108841365
GeneID 108841365
Organism Raphanus sativus

Protein

Length 1487aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018614128.1
Definition PREDICTED: LOW QUALITY PROTEIN: DDT domain-containing protein PTM-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category BK
Description PHD finger family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000122        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0007417        [VIEW IN EMBL-EBI]
GO:0007420        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009527        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009707        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010019        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016589        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019867        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031010        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031968        [VIEW IN EMBL-EBI]
GO:0031969        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0035064        [VIEW IN EMBL-EBI]
GO:0042170        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060322        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070603        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0140030        [VIEW IN EMBL-EBI]
GO:0140034        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1904949        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGCGAAGGCTCCTCGACCAAGGGGCAGACCGAGAAAACGGCAGAGACCAGAGGATGATAATCGAACAACAACGCCGCGTAGTAATGGGAATCGAGGGAAGAAGCAGGCTTTAGAAGTGGAGGCAGCGGTGGCGATATCTCTTCTGGGTCGTTATGTGCTGAAAGATTTCGGTAACGATGGAACGTTTCTAGGGAAGATAGTGTCTTACGAGACTGGCTTATACAGAGTGGAATACGAAGATGGTGATTTTGAGGATATGGAAACTTCTGATCTTCGTCCTTTCCTTATTGAGGATGATACTGATGAGAAGCTCTGCATTAGAAGGAGTAAGCTAGACAAACTCATAGTAAAGAAGGAGGAGAAAAAGAAAAAAAATCACAAAGGGGTTGTTGAGCTACAAAGTCATGTCAAGGCAACTTCCGAGGCAGATGCTGATTCAGATTCCTCTGATTCTGAAGATGAGAGAGGTTGTTTTGAGAATGAGGGTCCCGTTGTTCTGCCTCTCGATTTACCTCCTTCCTCACAAACAATTGCTATCCCGGAGGAAGCTGTTGTGCATCTCTTGTCTGTTTACGGCTTCTTAAGGTCCTTCAGTTTTCAGCTGTATATCTGCCTGTTTGAACTGGATGATTTTGTGGGAGCGTTGAAATTCTCAGGACCAAATTCGTTGTTGGATTCTGTTCATGTGGCCTTGCTGCGGGCATTGAAAGCTCATCTTGAGAGGCTCTCCGCAGACGACTCTGACCTTGCTTCAAAATGCTTGAAGTGCATTGATTGGGGCTTGCTCGATGTGCTAACTTGGCCTGTTTATTTGGTTCACTACTTAACTGCAATGGGACATGCAAGTGGGCCTCAGTGGAATTGGTTTTACAAATTTGTCCTGGAAATGGAGTATTATTCTTTACCCGTTGGGGTGAAATTGAAGATCCTACAAATTCTTTGTGATGATATCTTCGATGTAATAGATCTAAGAAGCGAAATAGATGCCCGTGAAGAATCTGAAATTGGATTTGATCCTGATAAAATTGCCACCAATCTTCCTGAAAACATACCTAGACGGGTCCAACCTAGATTCTATAAAGCCTCAGCTTGCATGGAGAAAGGGGCTATTGATATGGTCCCAGTAAAGCATGGGATAAGCTCAGCAAACGTGTCTAAAAATTTAGGTTCAAATGAAGTTAACTCAGATATGGATGAAAACAGCGATGAATGTAGGATTTGTGGAATGGATGGGACGTTGCTTTGTTGTGATGGATGTCCTTTAGCATATCACTCAAGATGCATTGGTGTGGTGAAAATGTATATACCAGACGGGCCATGGTTTTGTCCAGAGTGCTCTATCAACAAAAAGGGGCCGAAGATTGCTCATGGAACCTCACTTAGAGGAGCTGTACAGTTTGGAATGGATCCTCATGGGCGGTTCTTCTTGGGTACTTGCAATCACTTGCTGGTGCTTAACGTATCTGTCAATGGAGATACAACTGTAAAGTACTACAACGTCAATGACTTATCAAAAGTTGTACGAGTGCTTTTATCAGCATCAAGCCATGCGCTAGAATATCTGGATATCTGCAAAGCGATCGCCCAATACTGGGAACTTCCGGAAGGTATTATTATCTCTTTGAGGGAAAGATATATTGGTTTAAAGGATAAAGTGGATGCCAAGGTTTCGGAGATCAAGTCCGATAGTGCAAATATTTCCAGTAGGAATGACATCCAAACTGTCTATGACCTCCCGGAATCGGCTTTGAGTAATACTCGCAATGAAATTATAGGAGGTTCAAGTGGAATGCATGAGAAGAAATTGGCTGCTGGTGTTACATGCTCCGGCTTGTTATTTAAACCCCAAGCATACAATAATCATTACACAAACGGGGCGTTGGCTGTATCGGCTGCTGCCACTTTGGCTGATCTAACATCAGAGAAAGCCCATGAACCTGATCTTCGCAAGTACAGTTCTGCCAAGAAAGCTGCATCAAATAACATCTTAGTGCAGATGAAAGCATTTTCATTAGTACTAGCTTCACGTTTCTTCTGGCCAAGTCCTGATAAAAAGGAAATTACCAGAGAGAGGTGTGGTTGGTGTCATTCTTGCAAACTCACATCTGCAAGCAAGAGAGGATGCATGTTAAATGCAGCTGTATCGGGTGCCACCAAGGGTGCTATGAAGATCTTCAGTGGACTTTTTCCTCTAAGGAATGGGGATGGAATGCTTTCAAGTATTGCAGCATATGCTCAATATCTAGAGGAAAGCTTGCGTGGTCTGACTGCTGGACCATTTCTCAGTGAAATTCTCAGAAAACAGTGGCGTAAGCAGGTAGAGGAAGCCTCAACATGCAAAGCCCTAAAAGCACTCCTACTTGAACTTGAAGTAAATATTTGCAGTATTGCTCTGTCAACCGATTGGTTTAAACTGATGGACGATTGGTTGATCGAACTCTCTATGTTCCCAAGTGCTCCACTTACTGTTGTGGTTGCACAGAAACGTGGACCTGGTAGGAGGAGGCAAAGGAACCAGGCTGAAGTTACAGCTGAAGGTTCTGAAGATGATAGCTTTACTTGGTGGAGAGGAGGGAAGTTATCAAAAGTTATACTTTCGAAAGCAGTTTTGTCACAGCCAGCGATAAGGAAAGCAGCTTGTCAAGGCGGTTCTAAAAAGATATCTGTATTTAGTTATGGTGATGCTTCTTACATCCCTAAGAGAAGCAGGCGGTCTATTTGGAAAGCTGCAGTTGAAAGTAGTAAGAACATATCTCAGCTTGCTCTTCAGGTAAGGTATCTGGATATGAGTATAAGGTGGAGTGAACTCGTACGGCCAGAGCAAAATCTCCAGGATGTCAAAGGGCTAGAGACAGATGCCACCGTTTTTAGAAATGCTCGAATATGTGACAAAAAGACTAGTGATACCAAGGTTAGCTACGGAGTTTTCTTTGGAAATCAAAAGCATCTGCCATCACGAGTCATGAAGAATATAATCGAGGTTGAGAAAACCCAAGATGGAAATGAAAAGTATTGGTTTCAGGAAGCACGTGTTCCATCAAACAAATTATCGAAGCTGCAGAAAAAGCAGCTGAAAGCTTCCCGCACTGACTTATTTTCATATATAGCCTCAAGGAGGGACAACATGGAGAAATGTTCCTGTGCGTCATGTCATCATGATGTTCTGTTGCGGGATACAACAACATGGAGTTCGTGCCAAGGATTTTGTCACAATGAGTGCACTTGGAAATCACAACAAACAAATGGGAAAGTTGAAGTTCTGGTCACCTGCAAAAAATGCTACCTTGCAAAAACTCGTAGTCCAACTAATATCGATCACAGACAACCGACAACACCCCAGCTCACGATCACCGGACGACATCAAAATATAGTCACTCCAGTCATTAAGATTAAGCCTCCTAGTCAACAGTTACCATCCCAGAAAATACAGGAGAACCCTTCTGGAGTCAAACAAATTGCTCCTGCTTCCGCTGTTGCGTCCAATAGTCAACCGAAGACATTGTCTTGTGGAATCATGTGGAGGAAAAAGAACTTGGAGGACACAGGTGTTGATTTCAGGAAACAAAACATTCTCTTGGCTGGAAGATCAGATAAACCCAGTCTGGAACCAGTTTGTGGGCTCTGCCATCAGTCGTAAATTCATGGGTTGACGTATATTCACTGTAAAAAATGCGAAAAGTGGTTCCACACTGAAGCTGTTAAGCTGGAGGAGTCACAAATTCCTGAAGTGGTTGGGTTCAAGTGTTGCAAATGTCATCGTATACGACAACCTGAATGCCCTTACATGGATCCAAAACTCAGAGAACAGAAGGAGATCAAAAGATTAGTCTTAAAGAGCCAGAAACAAAGGCAAGGAAACTCCGGGTTGGATTCTGATTCGGAAAGAATGTCAGAACAACACGACTCGAAACCTTCTACTCCTATGTTTCCATCCATGGACGCATTTTTCCATGAGGATGATCCGCTCCTGGTATCAGTTTCCAAAGTTGAACAAATCACACCAACTAATTTCGATCTTGAATGGAACACGGGCGCTTCTGCACCTGGACCTCAGAAGCTACCAGTGAGAAGACAAGCGAAACGAGAAGACTTTAATCCCGAGCCTCAGCCTATGGTGAAACCCGAAGAAGCCGAGCAAGCTTTGCCTGTTGTCTCGGACTGGGATGCGTCTGGCGAGCTACTATTCGACTGCGAGGACATGGAATTTGAACCTCAGACCTATTTATCATTGACCGAGTTGCTAACTGCCGATGATAGCAACGGTCAGTATGAGGTAAATGGGGATAAGGATGTTCCAGTAATCAGCACTCAAGGAGAAGCAACAGAAGAAGATTATGAAGAGATGGGGCCATGTCAGAGATGTTCGCTAATACATTCTCACTGTTCTCCTTGGGAGGAACCATTGTCCTTCCTCGGAAGTAGCTGGAGCTGTGGTCAGTGCCGTGAGTGGCAGTAG
Protein:  
MEAKAPRPRGRPRKRQRPEDDNRTTTPRSNGNRGKKQALEVEAAVAISLLGRYVLKDFGNDGTFLGKIVSYETGLYRVEYEDGDFEDMETSDLRPFLIEDDTDEKLCIRRSKLDKLIVKKEEKKKKNHKGVVELQSHVKATSEADADSDSSDSEDERGSXFENEGPVVLPLDLPPSSQTIAIPEEAVVHLLSVYGFLRSFSFQLYICLFELDDFVGALKFSGPNSLLDSVHVALLRALKAHLERLSADDSDLASKCLKCIDWGLLDVLTWPVYLVHYLTAMGHASGPQWNWFYKFVLEMEYYSLPVGVKLKILQILCDDIFDVIDLRSEIDAREESEIGFDPDKIATNLPENIPRRVQPRFYKASACMEKGAIDMVPVKHGISSANVSKNLGSNEVNSDMDENSDECRICGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWFCPECSINKKGPKIAHGTSLRGAVQFGMDPHGRFFLGTCNHLLVLNVSVNGDTTVKYYNVNDLSKVVRVLLSASSHALEYLDICKAIAQYWELPEGIIISLRERYIGLKDKVDAKVSEIKSDSANISSRNDIQTVYDLPESALSNTRNEIIGGSSGMHEKKLAAGVTCSGLLFKPQAYNNHYTNGALAVSAAATLADLTSEKAHEPDLRKYSSAKKAASNNILVQMKAFSLVLASRFFWPSPDKKEITRERCGWCHSCKLTSASKRGCMLNAAVSGATKGAMKIFSGLFPLRNGDGMLSSIAAYAQYLEESLRGLTAGPFLSEILRKQWRKQVEEASTCKALKALLLELEVNICSIALSTDWFKLMDDWLIELSMFPSAPLTVVVAQKRGPGRRRQRNQAEVTAEGSEDDSFTWWRGGKLSKVILSKAVLSQPAIRKAACQGGSKKISVFSYGDASYIPKRSRRSIWKAAVESSKNISQLALQVRYLDMSIRWSELVRPEQNLQDVKGLETDATVFRNARICDKKTSDTKVSYGVFFGNQKHLPSRVMKNIIEVEKTQDGNEKYWFQEARVPSNKLSKLQKKQLKASRTDLFSYIASRRDNMEKCSCASCHHDVLLRDTTTWSSCQGFCHNECTWKSQQTNGKVEVLVTCKKCYLAKTRSPTNIDHRQPTTPQLTITGRHQNIVTPVIKIKPPSQQLPSQKIQENPSGVKQIAPASAVASNSQPKTLSCGIMWRKKNLEDTGVDFRKQNILLAGRSDKPSLEPVCGLCHQSXIHGLTYIHCKKCEKWFHTEAVKLEESQIPEVVGFKCCKCHRIRQPECPYMDPKLREQKEIKRLVLKSQKQRQGNSGLDSDSERMSEQHDSKPSTPMFPSMDAFFHEDDPLLVSVSKVEQITPTNFDLEWNTGASAPGPQKLPVRRQAKREDFNPEPQPMVKPEEAEQALPVVSDWDASGELLFDCEDMEFEPQTYLSLTELLTADDSNGQYEVNGDKDVPVISTQGEATEEDYEEMGPCQRCSLIHSHCSPWEEPLSFLGSSWSCGQCREWQ